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논문검색

A Comparative Study of Genetic Variations between Dengue Virus Subtypes 1 and 2

초록

영어

Because of global climate change, mosquitos which are vectors for the dengue virus (DENV) are increasing in population and the incidence of dengue fever and dengue hemorrhagic fever is increasing every year in countries not only in the subtropics but also in other regions worldwide. There are 4 subtypes of DENV, each differing in infectivity and virulence. This study compared and analyzed genetic variation in the genomic sequences of DENV subtypes 1 and 2. The results showed that while non-synonymous codon variation was high in DENV-1, synonymous codon variation was also high in DENV-2. Additionally, there were differences in the genetic variation in each subtype according to the year or region, and incidence levels increased during periods when sequence variation was high. The results of this study can be used to compare the subtype-specific genetic variation characteristics of DENV to predict the incidence rates and sequence variations of DENV according to the region or year.

목차

Abstract
 1. Introduction
 2. Materials and Methods
  2.1 Collection of Nucleotide Sequence
  2.2 Phylogenetic Analysis
  2.3 Comparison of Codon Substitution Pattern
 3. Results
 4. Discussion and Conclusions
 References

저자정보

  • Jin-Hwa Jang Biomedical Prediction Technology Laboratory, Korea Institute of Science and Technology Information, Laboratory of Computational Biology and Bioinformatics, Institute of Public Health and Environment, Graduate School of Public Health, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 151-742, Republic of Korea
  • Youngmahn Han Biomedical Prediction Technology Laboratory, Korea Institute of Science and Technology Information, 245 Daehak-ro, Yuseong-gu, Daejeon 305-806, Republic of Korea
  • Insung Ahn Biomedical Prediction Technology Laboratory, Korea Institute of Science and Technology Information, 245 Daehak-ro, Yuseong-gu, Daejeon 305-806, Republic of Korea

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