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Homology Modeling of CCR 4: Novel Therapeutic Target and Preferential Maker for Th2 Cells

초록

영어

C–C chemokine receptor type 4 (CCR4) is a chemokine receptor with seven transmembrane helices and it belongs to the GPCR family. It plays an important role in asthma, lung disease, atopic dermatitis, allergic bronchopulmonary aspergillosis, cancer, inflammatory bowel disease, the mosquito-borne tropical diseases, such as dengue fever and allergic rhinitis. Because of its role in wide spectrum of disease processes, CCR4 is considered to be an important drug target. Three dimensional structure of the protein is essential to determine the functions. In the present study homology modeling of human CCR4 was performed based on crystal structure of CCR5 chemokine receptor. The generated models were validated using various parameters. Among the generated homology models the best one is selected based on validation result. The model can be used for performing further docking studies to identifying the critical interacting residues.

목차

Abstract
 1. Introduction
 2. Experimental Section
  2.1. Sequence Analysis of CCR4
  2.2. Model Building and Validation
 3. Results and Discussion
  3.1. Sequence Analysis of CCR4
  3.2. Homology Modeling and Validation
 4. Conclusion
 References

저자정보

  • Shalini M. Department of Bioinformatics, School of Bioengineering, SRM University, SRM Nagar, Kattankulathur, Chennai 603203, India
  • Thirumurthy Madhavan Department of Bioinformatics, School of Bioengineering, SRM University, SRM Nagar, Kattankulathur, Chennai 603203, India

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