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논문검색

Comparative Molecular Similarity Indices Analysis of Caspase-3 Inhibitors

초록

영어

Caspases, a family of cysteinyl aspartate–specific proteases plays a central role in the regulation and the execution of apoptotic cell death. Activation of caspases-3 stimulates a signaling pathway that ultimately leads to the death of the cell. Hence, caspase-3 has been proven to be an effective target for reducing the amount of cellular and tissue damage. In this work, comparative molecular similarity indices analysis (CoMSIA) was performed on a series of 3,4- dihydropyrimidoindolones derivatives which are inhibitors of caspase-3. The best predictions were obtained for CoMSIA model (q 2 = 0.586, r 2 = 0.955). The predictive ability of test set (r 2 pred) was 0.723. Statistical parameters from the generated QSAR models indicated the data is well fitted and have high predictive ability. Our theoretical results could be useful to design novel and more potent caspase-3 derivatives.

목차

Abstract
 1. Introduction
 2. Computational Details
  2.1. Dataset
  2.2. Molecular Modeling
  2.3. Alignment Method
  2.4. CoMSIA Model Generation
  2.5. Partial Least Squares (PLS) Analysis
 3. Results and Discussion
  3.1. CoMSIA Model Analysis
 4. Conclusion
 References

키워드

저자정보

  • Sathya Babu Department of Bioinformatics, School of Bioengineering, SRM University, SRM Nagar, Kattankulathur, Chennai 603203, India
  • Thirumurthy Madhavan Department of Bioinformatics, School of Bioengineering, SRM University, SRM Nagar, Kattankulathur, Chennai 603203, India

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