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Phylogenetic Analysis of Pines Based on Chloroplast trnT-trnL Intergenic Spacer DNA Sequences

원문정보

초록

영어

This study was conducted to distinguish the pines that are too similar to differentiate using conventional methods. Pinus densiflora and Pinus sylvestris have similar anatomical structure. They both have window-like pits and dentate ray tracheids, so it is not easy to distinguish the plants. We tried to find molecular markers by comparing chloroplast DNA sequences to differentiate the pines growing in Korea. We used P. densiflora, P. densiflora for. multicaulis, P. sylvestris, P. rigida, P. rigitaeda, P. koraiensis, and P. bungeana for this study. We found that the non-coding intergenic region of trnT(UGU) and trnL(UAA) genes have differences among the species. We designed a primer set to amplify the region efficiently and compared the PCR product sequences using CLC Workbench programs to find the polymorphism. We could distinguish the species using the sequences of the amplified region and the sequences were reproducible from the pines collected in Korea.

목차

Abstract
 Introduction
 Materials and Methods
  Plant materials and DNA extraction
  PCR amplification
  Sequencing of PCR products
 Results and Discussion
 Acknowledgements
 References

저자정보

  • Yurry Um Department of Herbal Crop Research, National Institute of Horticultural and Herbal Science, RDA, Eumseong 369-871, Republic of Korea
  • Won-Kyu Park Departments of Wood & Paper Science,
  • Nam-Su Jo Department of Forest Genetic Resources, Korea Forest Research Institute, Suwon 441-350, Republic of Korea
  • Yi Lee Plant Science & Technology, Chungbuk National University, Cheongju 361-763, Republic of Korea

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