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Precise H1N1 swine influenza detection using stuffer-free MLPA-CE-SSCP

초록

영어

In April 2009, H1N1 influenza (swine flu) was identified for the first time and the virus has spread worldwide to become pandemic. The infection with swine influenza can only be confirmed by polymerase chain reaction (PCR) assays. However, other special PCR assays are needed to sub-typing and further characterization. Here, we developed a new method to discriminate various types of influenza A, including H1N1, using stuffer-free multiplex ligation-dependent probe amplification based on a capillary electrophoresis–single-strand conformation polymorphism. Unlike conventional methods, this approach precisely detects five relevant gene markers permitting confirmation of infection. As a result, all the five genes were respectively identified using synthetic genes and also verified with total RNA of the H1N1 influenza virus. The method had a limit of detection of approximately 32.5 pfu/ml, which is similar to that of the PCR-based technique. These results indicate that the RT-MLPA-CE-SSCP system have considerable potential in clinical diagnosis.

저자정보

  • Boram CHUNG School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang 790-784. 1Institute of Environmental and Energy Technology, POSTECH, Pohang 790-784.
  • Gi Won SHIN School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang 790-784. 1Institute of Environmental and Energy Technology, POSTECH, Pohang 790-784.
  • Hee Sung HWANG School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang 790-784. 1Institute of Environmental and Energy Technology, POSTECH, Pohang 790-784.
  • Jeongkyeong NA School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang 790-784. 1Institute of Environmental and Energy Technology, POSTECH, Pohang 790-784.
  • Woong CHOI School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang 790-784. 1Institute of Environmental and Energy Technology, POSTECH, Pohang 790-784.
  • Gyoo Yeol JUNG School of Interdisciplinary Bioscience and Bioengineering, POSTECH, Pohang 790-784. 1Institute of Environmental and Energy Technology, POSTECH, Pohang 790-784.

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